The eye went right over them as well and i know there was damage, but cant find any articles/pictures mainly of STB damage....how did gustavia harbor fare? The shops.? Houses and hotels?

I've been following sbhonline.com. It appears they are getting back to normal quicker than SXM. Although, they are still continuing to assess damage to the various Villas. Gustavia looked like it fared fairly well from some of the photos.
We sailed SXM,AXA and SBH in June of '16. It was our fourth trip over 12 years there. It's mind numbing to see the destruction of so many of our favorite places. With the BVI hit so hard, the charter boat fleets will take a while to recover. We hope to be back soon. Our thoughts and prayers go out to all those trying to rebuild and recover.
Sail on ...

The 5-star beachfront hotels will be offline for a year. The local newspaper just published today (in French). http://www.journaldesaintbarth.com/journaux/pdf/Journal1246.pdf

If you’re on FB, they just posted 50+ photos on the Le Journal de St Barth FB page,