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LocalSailor said:
If you skipped Cruz Bay on that route how was the reception and also the formalities of clearing in at the C&I offices in Charlotte Amalie?

You are allowed to check in at the C&I offices at Charlotte Amalie if that's your first point of contact in the USVI. You actually take the boat into CYOA and then make the 5 minute walk over to C&I with everyone and their passports.